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Enteric Fever:- Part 1 – Typhoid Fever (Salmonella typhi), Diagnosis and Treatment

Enteric Fever:- Part 1 – Typhoid Fever (Salmonella typhi), Diagnosis and Treatment
March 28, 2022Lab TestsMicrobiology

Typhoid Fever, Enteric Fever (Salmonella typhi)

Sample for Typhoid Fever

  1. A widal test can be done on the serum of the patient.
  2. Feces can be used for the culture.
  3. A blood culture can be done and is positive in the early stage of the fever.
  4. Urine may also be needed for the culture.
  5. In a few cases, a bone marrow sample can be cultured.

Precautions for Typhoid Fever

  1. The widal test will be positive after 7 to 10 days of the onset of fever.
  2. Culture gives the early result to detect the bacilli.

Definition of Typhoid Fever

  1. Typhoid/Enteric  fever is a syndrome that is characterized by:
    1. Fever.
    2. Headache.
    3. Cough.
    4. Splenomegaly.
    5. Leucopenia.

Typhoid Fever facts

  1. Typhoid fever is caused by Salmonella typhi, also called enteric fever.
  2. Enteric fever is an acute illness characterized by fever, headache, and abdominal discomfort.
  3. This clinical syndrome is characterized by fever, GIT symptoms, and headache.
  4. Salmonella infections are divided into:
    1. Typhoidal infection caused by S.typhi.
    2. S. paratyphi generally has a less severe illness caused by S. Paratyphi A, B, or C.
    3. Non-typhoidal infection most common in the USA caused by:
      1. S. Typhimurium.
      2. S. Enteritidis.
    4. Salmonella is quite uncommon in the USA; 70% are acquired from abroad.
    5. Humans are the only source of this infection (S. Typhi and S. paratyphi), and the spread is from person to person or via contaminated foods or water.

Epidemiology of Typhoid Fever

  1. Salmonella habitat is an animal gut. Predominantly animal pathogens can also cause disease in man.
  2. Foodstuffs from animal sources are important vehicles in the transmission of infection.
  3. Salmonella is found in humans as well as in chickens and eggs.
    1. It spreads by eating the chickens and uncooked eggs.
  4. It spreads only through close contact with an acutely infected person or chronic carrier.
  5. Most cases occur through contaminated foods or water.
  6. This is a global issue with 13 to 17 million cases and ∼60,000 deaths per year.
  7. Children under one year are more prone to develop an infection, and the diseases are more severe.
  8. There is increasing antibiotics resistance to this disease.
  9. Enteric fever includes typhoid and paratyphoid fever.
    1. Paratyphoid fever is generally mild than typhoid fever.
  10. The Salmonella species cause typhoid fever.
    1. Salmonella typhi and S.paratyphi differ from the other species in that man is the only natural host.

Microbiology of Salmonella typhi:

  1. Salmonella typhi and S. paratyphi differ from the other species because humans are the only natural hosts.
  2. Salmonella serologically divided into:
    1. Salmonella typhi.
    2. Salmonella cholerae-suis.
    3. Salmonella enteritidis.
  3. Salmonella is different from the other types because it lives in the gastrointestinal tracts of animals and infects humans when there is the contamination of food or water with animal feces.
  4. S.Typhi can grow on ordinary media.
  5. From the feces, culture on the MacConkey agar (or Desoxycholate citrate agar) will see pale non-lactose fermenter colonies.
    1. Colonies on Xylose lysine desoxycholate agar show a red color colony with a central black area.
    2. Wilson’s and Blair’s Bismuth sulfite agar shows black metallic colonies due to H2S production.
  6. S.Typhi are motile due to flagella.
    1. Generally, salmonellae produce acid and gas from carbohydrates except for S.typhi, which does not produce gas.
  7. Summary of Salmonella typhi:
  8. Gram stain negative bacilli (rods). These are seen as single pairs and chains.
    1. These are motile.
    2. These are aerobic.
    3. Non-lactose fermenter.
    4. Produce H2S gas.
  9. Colonies are gray and can grow on ordinary media (blood agar).
  10. Selective media are:
    1. Culture may be taken from the feces.
    2. MacConkey agar  = pale non-lactose fermenting coloies.
    3. Desoxycholate citrate agar = pale non-lactose fermenting colonies.
    4. Xylose-lysine desoxycholate agar = observe for red colonies with a black center.
    5. Wilson and Blair’s bismuth sulfite agar = observe black metallic colonies due to H2S production.
    6. Selenite F and tetrathionate broth for enrichment, then subculture to MacConkey agar.
  11. Their capsules consist of polysaccharides.
  12. These are motile with flagella.

Salmonella has three antigens (Virulence factors):

  1. There are three types of antigens:
  2. O – antigen (somatic) is present in the body of bacteria. It is endotoxin and provides antigenic variation.
    1. This resists alcohol extraction and is thermostable.
  3. H – An antigen (flagellar) is present in the flagella of the bacteria.
    1. It provides antigenic variation and motility.
    2. Flagella antigen undergoes variation by gene rearrangement.
  4. Vi –  antigen (capsular or envelope) is the most superficial of the somatic antigen of S. Typhi. Vi means virulence.
    1. This polysaccharide capsule surrounds the O antigen, thus protecting the bacteria from an antibody attack on the O antigen.
    2. This aids in resistance to antibodies and complement.
  5. There are respective three antibodies:
    1. Anti-O antibody.
    2. Anti-H antibody.
    3. Anti-V antibody.
Typhoid bacilli structure

Typhoid bacilli structure

Mode of the spread of Typhoid Fever

  1. Contaminated food (including meat).
  2. Contaminated water supply.
Typhoid fever (Salmonella Typhi), Pathology

Typhoid fever (Salmonella Typhi), Pathology

The incubation period

  1. It is 5 to 14 days and sometimes is longer (1 to 3 weeks after exposure and includes fever, headache, and abdominal pain).
  2. The incubation period for salmonella gastroenteritis is 6 to 72 hours.

Pathogenesis:

  1. There are three types of disease:
    1. Enteric fever.
    2. Gastroenteritis.
    3. Septicemia.
  2. This organism crosses the intestinal epithelium (invade the regional lymph nodes) multiply in the macrophagic cells of  Peyer’s patches, mesenteric lymph nodes, and spleen.
  3. The Peyer’s patches inflamed and may ulcerate.
  4. Bacteremia occurs, and the infection spreads to the lungs, gallbladder, kidneys, and CNS.
  5.  Finally, these bacteria settle in various organs.
  6. During this invasion, these bacteria are phagocytosed by the monocytes (mononuclear phagocytes) and can survive intracellularly, so these are called facultative intracellular parasites.
    Enteric bacilli intracellular called I/C parasite

    Enteric bacilli intracellular called I/C parasite

  7. Enteric fever is caused by the S.typhi and S. paratyphi A, B, C.
  8. These bacteria cause gastroenteritis, food poisoning, and a few special species that may cause septicemia.
  9. Rarely salmonella may cause osteomyelitis, septic arthritis, and other purulent lesions.
    Typhoid fever pathogenesis and cycle

    Typhoid fever pathogenesis and cycle

Pathology of salmonella (Enteric fever):

The involvement by the salmonella bacteria is in stages.

  1. In the first week, there is bacteremia.
  2. There is splenomegaly in the second week, widespread reticuloendothelial system involvement, and foci of necrosis in the liver.
  3. In the third week, there is ulceration of peyer patches with intestinal ulcers and bleeding.
  4. Lastly, these bacteria colonize in the gallbladder leading to a chronic carrier state.
  5. Chronic infection may lead to infection of the joints, bones, meninges, and other sites.
    Pathology of the enteric fever (S. typhi)

    Pathology of the enteric fever (S. Typhi)

Signs and Symptoms  of Typhoid fever (Enteric fever)

  1. The onset of illness is insidious and non-specific, with intermittent fever, headache, and abdominal pain.
  2. Salmonella causes four types of diseases:
    1. Typhoid fever.
    2. Sepsis.
    3. Gastroenteritis (diarrhea).
    4. Carrier state.
  3. The incubation time is 7 to 14 days ( and the range is 3 to 60 days).
  4. The relapse occurs in 5 to 10% of the untreated cases.
  5. Salmonella infection is more common in children less than 10 years of age.

Prodromal stage:

  1. Malaise, headache, cough, sore throat, abdominal pain, and constipation.
    1. Diarrhea is a late symptom and is usually in the third week of illness.
  2. Fever: It is constant and ascends in a stepwise pattern.
    1. It starts rising in the first week, and the peak is the second week, and then it starts coming down in the third week.
  3. 7 to 10 days: There is  Paek and patients are sicker.
    1. Early diarrhea.
    2. Abdominal distension and cramps.
  4. Patients improve after 7 to 10 days.
    1. Untreated cases recover in about 4 weeks.
    2. Symptoms disappear with antibiotics within 3 to 4 days.
    3. Relapse may occur after 2 weeks.
Salmonella typhi course

Salmonella typhi course

 

The gastroenteritis incubation period is 8 to 24 hours.

  1. There are nausea and vomiting.
  2. There is abdominal pain.
  3. There is diarrhea.
    1. Stools are typically loose, moderate volume, and do not contain blood.
    2. Diarrhea is self-limited and may last for 3 to 7 days.
  4. There may be a fever.
  5. Pregnant ladies who get an enteric fever are more prone to abortion.
  6. This is a self-limiting disease, and recovery is usually within a week.
  7. Sometimes S/S may mimic appendicitis or inflammatory bowel disease.

Physical findings are:

  1. In the early stage, there is abdominal tenderness.
  2. Hepatosplenomegaly.
  3. Scanty maculopapular rash (rose spot).
Typhoid fever typical symptoms

Typhoid fever typical symptoms

Complications are:

  1. There are complications without treatment or even after the treatment, usually after the third week of the disease, like:
    1. Meningitis.
    2. Lobar pneumonia.
    3. Osteomyelitis.
    4. Intesitinal hemorrage.
    5. Intestinal perforation.
    6. By the 4th week of the illness, the patients gradually improve, but 30% of the patients will die in developing countries.
      1. 10% of the untreated cases will have relapses.
      2. 1% to 2% of the cases in the USA have mortality.
        Enteric fever signs, symptoms, and course of the disease

        Enteric fever signs, symptoms, and course of the disease

  1. There may be:
    1. Relapse.
    2. Intestinal Perforation.
    3. Hemorrhage in the GIT.
    4. Myocarditis.
    5. The lungs may show a pneumonia picture.
    6. Rarely periostitis.
    7. Most pregnancies end up in abortion.
    8. There may be bacteremia.
    9. When salmonella enters the bloodstream, Sepsis will infect the lungs, brain, and bone.
  2. Late complications:
    1. Intestinal hemorrhage may be occult in 20% of the cases; it usually occurs during the 2nd or 3rd week.
    2. It is less common in treated cases.
    3. Intestinal perforation occurs in 3% of the untreated patients.
    4. Relapse occurs in one-fifth of the patients.
    5. Secondary suppurative lesions are seen in the lung (pneumonia), parotid gland (parotitis), and furunculosis.
  3. Laboratory findings due to complications are:
    1. Increased level of LDH, Alkaline phosphatase, and SGOt enzyme.
    2. There is increased CPK in some of the patients.
    3. Abnormal liver function tests.

Carrier state of enteric fever (Typhoid fever)  patient:

  1. Roughly 30% of the patients become carriers due to persistent infection of the gallbladder.
    1. After the clinical recovery, 5% to 10% of the patients will continue to excrete S.typhi for several months, and these are the convalescent carrier.
    2. 1% to 4% of the patients continue to carry the organisms for >1 year; this is a chronic stage.
  2. These people have no active disease and are symptoms free.
  3. The bacterias from the gallbladder are constantly discharged into the intestine and ultimately go out in the feces.
  4. The carrier may have cholecystitis and gallstones.
    1. This is difficult to eradicate the carrier of S. Typhi from the gall bladder.
  5. Antibiotics are effective in some of the carriers.
  6. While in most cases, bacteria persist and give rise to long-term permanent carriers.
  7. Some carriers require surgical removal of the gall bladder to cure them.
  8. Important: Everybody should wash their hands when they come out of the toilet/washroom.
  9. Pregnant ladies end up with abortions in enteric fever.

Lab Diagnosis of enteric fever (typhoid fever):

  1. CBC shows:
    1. Low TLC, leucopenia.
  2. Culture of blood, bone marrow, intestinal secretion, feces, and urine can be done.
  3. Blood culture is positive in the first week of infection in 80% of the cases. But blood culture may reach 90% of the cases, decreasing to 50% in the third week.
    1. Roughly 105 to 109 organisms are required for the culture, but this count may be low in infants and older adults.
      1. This count may be low in patients taking antacids and H2 receptor blockers.
    2. Blood culture is positive in 80% of the cases in the first week of infection.
    3. Blood culture is considered 100% specific.
    4. Buffy coat may decrease the time for isolation.
    5. This is subcultured on the MacConkey media.
  4. Bone marrow culture is more sensitive than the blood culture but is usually not required.
  5. These bacteria are:
    1. Non-lactose fermentor.
    2. Motile.
    3. Produce H2S.
Typhoid bacilli seen on culture

Typhoid bacilli were seen in the culture.

  1. Bonemarrow culture will be positive and may have a high yield of up to 90% sensitivity.
  2. Stool examination show leucocytes and rarely RBCs.
  3. Stool culture will be a positive but not reliable test. This will be positive within the first 7 days of infection.
    1. This is negative in 60 to 70% of the cases during the first week if the patient is untreated, then positive in these patients in the third week.
    2. The chronic carrier may have stool culture positive even up to one year.
    3. Feces cultures on solid selective media:
      1. Desoxycholate citrate agar where there are non-lactose fermenting colonies.
      2. McConkey medium shows non-lactose fermenting colonies.
      3. There is no gas and no fermentation of sugar.
      4. Xylose lysine desoxycholate agar shows red colonies with a black center.
  4. Laboratory culture findings of salmonella are:
    Lab test Result
    Oxidase test Negative
    Indol Negative
    Lactose (nonlactose fermenter) Negative
    Urease Negative
    Voges-Proskauer Negative
    Simmon’s citrate Positive/Negative
    TSI (Produce H2S) Positive (except S.typhi is negative)
  5. Salmonella has 5 serogroups: A, B, C, D, and E, based on O somatic antigen.
    1. Based on H-antigen are 1200 serotypes.
      1. 7 to 10 days antibody to D-somatic antigen appears.
        1. These antibodies against O antigens reach their peak by 3 to 5 weeks.
      2. H-flagellar antibodies appear later on.

Widal test for the diagnosis of enteric fever (Typhoid fever):

  1. The widal test was developed in 1896.
    1. Will be positive after 7 to 10 days of infection.
    2. The blood, bone marrow, bile, and stool culture is superior to the widal test for typhoid fever or carrier state diagnosis.
    3. If the culture’s facilities are not available, then the widal test is valuable for the diagnosis.
  2. The titer of O-antibodies 1:80 is suspicious in unvaccinated patients.
    1. The titer of 1:160 is strongly suggestive of infection in unvaccinated individuals.
    2. The titer of 1:40 for Antibody to flagellar-antigen (H) are suspicious in unvaccinated individual.
      1. While 1:160 is strongly suggestive.
    3. Titers are much higher in the vaccinated individual.
  3. Vi antigen for S.typhi is used to screen the carrier. Antibodies to Vi-antigen are positive in only 70 % of the chronic carrier of S.typhi.

Widal test reporting:

Serial dilution in the widal test

Serial dilution in the widal test

The procedure of the widal test and reporting

The procedure of the widal test and reporting

Drawbacks of the Widal test:

  1. Antibodies are absent in the early illness, may appear after 7 days.
  2. Antibodies may not develop due to antibiotic therapy.
  3. Antibody response is variable and does not correlate with the severity of the disease.
  4. In some patients, there is no adequate level of O-antibody titer.

Typhidot test:

  1. The manufacturing companies claim that it would be positive after 2 to 3 days.
Typhidot interpretation

Typhidot interpretation

  1. The urine culture may be done and is positive in the case of enteric fever but is less sensitive.
    1. This is positive in the third or fourth week of the infection.
    2. This is done on the MacConkey media.
  2. Bacteriophage typing is done to identify the different strains of S.typhi and Paratyphi.
    1. This is useful for the epidemiological investigation in case of the outbreak’s source.
  3. Summary of diagnosis typhoid fever:
    1. Samonella is non-motile.
    2. Biochemical tests show acid and gas formation from the carbohydrate.
      1. S.typhi does not produce gas formation.
    3. Serologically can identify antigens.
      1. O somatic antigen.
      2. H flagellar antigen.
      3. Vi  surface antigen

 Summary of the available lab tests for the diagnosis of Typhoid fever:

Enteric fever diagnostic tests

Enteric fever diagnostic tests

Summary of typhoid fever diagnostic tests:

  1. White blood cell count: It is low during the first two weeks.
    1. It is decreased from 4000 to 6000/cmm.
    2. 3000 to 5000/cmm during the next two weeks.
    3. 10,000/cmm or more/cmm may suggest perforation or sepsis (suppuration).
  2. There may be anemia, and this may be due to bleeding and is hypochromic and microcytic.
  3. Blood cultures are positive during the first 10 days, in 90% of the patients and relapse.
    1. <30% are positive after the third week.
  4. Stool culture is positive after the 10th day, increasing frequency up to the 4th or 5th week.
    1. Stool culture-positive after 4 months indicates a carrier.
  5. Urine culture is positive during the 2nd to 3rd week in 25% of the patients; even the blood culture is negative.
  6. Widal test: H and O agglutinins appear in the serum after 7 to 10 days, increase to the peak in 3rd to 5th week, then gradually fall for several weeks; there is no increase during the relapse.
    1. O Antibody appears before the H appears and is usually higher at the beginning.
    2. During convalescence, the H titer becomes higher than the O antibody.
    3. The widal test may be positive in case of vaccination or previous infection.
    4. Early treatment with antibiotics may cause titer to remain low or negative.
Typhoid fever diagnosis summary

Typhoid fever diagnosis summary

Treatment of the Enteric fever (Typhoid fever)

  1. The drug of choice is Ciprofloxacin.
  2. Chloramphenicol is also effective, but this may have serious side effects.
  3. Co-trimoxazole is also used and has less serious side effects than Chloramphenicol.

Treatment of the carrier of enteric fever

  1. The carriers are asymptomatic.
  2. It is documented that the carrier shed S.tryphi in the stool for one year and is observed in 1 to 3% of these patients.
    1. The gallbladder is the site for persistent infection.
  3. It is difficult to eradicate S.Typhi from the gallbladder. Mostly these are permanent carriers.
  4. To eradicate carrier infection, prolonged use and a high dose of antibiotics are needed.
  5. Ampicillin is the drug of choice, but it must be given in higher doses and prolonged.
  6. Chloramphenicol is not suitable for carriers.
  7. Ciprofloxacin has good results.

Control of the typhoid fever

  1. The Hygenic measure like:
    1. Clean water supply.
    2. Adequate disposal of the sewage material.
    3. Washing of the hands after the defecation. The best is to wash your hands with soap at least three times.
    4. Take care of food handling and processing.
  2. For the carriers, give them treatment and advise them to wash their hands after the defection.
  3. Vaccination should be advised in the family with a history of enteric fever.
    1. Injectable vaccine.
    2. The oral vaccine is replacing the injectable vaccines. These are Vi capsular polysaccharides.

Vaccines types used:

Type of vaccine Dose of vaccine Remarks
Vi capsular polysaccharide (ViCPS) Typhim Vi
  1. 25 µg in 0.5 mL I/M given once
  2. Booster dose every 2 years
  1. Side effect fever  = 1%
  2. The headache  = 1.5 to 3%
  3. Local erythema or induration = 7%
  4. Not recommended for children <2 years
Heat killed the whole organism (S.typhi)
  1. 0.5 mL I/M = two doses
  2. 4 weeks apart
  3. Booster 0.1 mL every three years
  4. Dose for children 6 months to 10 years = 0.25 mL I/M
  1. Fever = 17 to 29%
  2. Headache severe = 10%
  3. Pain at the site of injection = 35 to 60%

Ty21a (Vivotif Berna)

This is live oral, attenuated live bacteria

  1. One capsule one hour before a meal
  2. Gien for 4 days
  3. Booster every 5 years
  1. There are a few sides effects
  2. Not given in the immunocompromised patients.
  3. Not given in children <6 years of age.

For the layman:

  1. The widal test will be positive after 7 to 10 days of typhoid fever.
    1. O antigen indicates an acute infection and is early to rise.
    2. H antigen appears late than O antigen and indicates past infection or vaccination.
    3. The titer of  O antigen 1:40 is negative.
      1. The titer of 1:80 is borderline; repeat the widal test after 5 to 7 days.
      2. A rising titer will indicate typhoid fever.
      3. If the level is the same, then less likely for typhoid fever.
    4. The widal test will be negative in the first 3 to 7 days of typhoid fever.
    5. In the first few days, advise blood culture.

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